New software tool automates mass spectrometry quality control

phys.org September 4, 2024, 05:00 PM UTC

Summary: A new software tool, PeakQC, developed by scientists at Pacific Northwest National Laboratory and the Environmental Molecular Sciences Laboratory, automates quality control for mass spectrometry data across various "omics" fields, including proteomics and metabolomics. Published in the Journal of the American Society for Mass Spectrometry, PeakQC enhances data reliability and reproducibility, utilizing advanced algorithms and machine learning, and is freely available for users.

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I'm replacing the original 8-factor scoring system with a new and improved one. It doesn't use the original factors and gives much better significance scores.

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